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Showing posts with the label Bioinformatics
Using Regex To Search Until Desired Pattern

Using Regex To Search Until Desired Pattern

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I am using the following regex: orfre = '^(?:...)*?((ATG)(...){%d,}?(?=(TAG|TAA|TGA)))' % (… Read more Using Regex To Search Until Desired Pattern
Optimization Of An All-paths Algorithm

Optimization Of An All-paths Algorithm

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I've been successful using the following algorithm to complete all-path data up to path length … Read more Optimization Of An All-paths Algorithm
Using The Reserved Word "class" As Field Name In Django And Django Rest Framework

Using The Reserved Word "class" As Field Name In Django And Django Rest Framework

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Description of the problem Taxonomy is the science of defining and naming groups of biological orga… Read more Using The Reserved Word "class" As Field Name In Django And Django Rest Framework
Finding Matching Keys In Two Large Dictionaries And Doing It Fast

Finding Matching Keys In Two Large Dictionaries And Doing It Fast

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I am trying to find corresponding keys in two different dictionaries. Each has about 600k entries.… Read more Finding Matching Keys In Two Large Dictionaries And Doing It Fast
What Causes Python Error 'bad Escape \c'?

What Causes Python Error 'bad Escape \c'?

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I just wrote a function that will look at a text file and count all of the instances of True and Fa… Read more What Causes Python Error 'bad Escape \c'?
How To Convert A Set Of Dna Sequences Into Protein Sequences Using Python Programming?

How To Convert A Set Of Dna Sequences Into Protein Sequences Using Python Programming?

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I am using python to create a program that converts a set of DNA sequences into amino acid (protein… Read more How To Convert A Set Of Dna Sequences Into Protein Sequences Using Python Programming?